GeCCO (Genomic CNV Classification Objectively) is a bioinformatics tool for classifying copy number variants as either benign or pathogenic.
Latest 5 files |
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名稱 | 大小 | 日期 | 下載總數 |
CNVClassifier.jar | 14.6 KB | 2014-08-11 21:19 | 7 |
FeatureExtractor.jar | 32.7 KB | 2014-08-11 21:19 | 11 |
GeCCO_2.0.zip | 289.2 MB | 2014-04-10 23:50 | 3 |
CNVClassifier.jar | 253.9 KB | 2014-04-10 21:09 | 2 |
gpl.txt | 34.3 KB | 2013-07-09 18:17 | 2 |
All Files |
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Source | |||
CNVClassifier.jar | 14.6 KB | 2014-08-11 21:19 | 7 |
FeatureExtractor.jar | 32.7 KB | 2014-08-11 21:19 | 11 |
GeCCO_2.0.zip | 289.2 MB | 2014-04-10 23:50 | 3 |
bin_2_0_0 | |||
lib | |||
CNVClassifier.jar | 253.9 KB | 2014-04-10 21:09 | 2 |
log4j-1.2.13.jar | 349.8 KB | 2013-07-09 18:04 | 8 |
mysql-connector-java-3.1.8-bin.jar | 399.6 KB | 2013-07-09 18:04 | 305 |
weka.jar | 5.0 MB | 2013-07-09 18:04 | 3 |
bin | |||
gpl.txt | 34.3 KB | 2013-07-09 18:17 | 2 |
error_messages.txt | 0.6 KB | 2013-07-09 18:17 | 1 |
configfile.txt | 1.6 KB | 2013-07-09 18:17 | 4 |
CNVClassifierGUI.bat | 0.2 KB | 2013-07-09 18:17 | 3 |
log4jconfig.txt | 0.5 KB | 2013-07-09 18:17 | 2 |
etc | |||
ucsc_genomeFiles | |||
hg18 | |||
genomicSuperDups.txt.gz | 2.8 MB | 2013-07-09 18:16 | 25 |
chrY_rmsk.txt.gz | 1.1 MB | 2013-07-09 18:16 | 2 |
chrX_rmsk.txt.gz | 6.7 MB | 2013-07-09 18:16 | 9 |
chr22_rmsk.txt.gz | 1.8 MB | 2013-07-09 18:16 | 1 |
chr20_rmsk.txt.gz | 3.1 MB | 2013-07-09 18:16 | 2 |
chr21_rmsk.txt.gz | 1.5 MB | 2013-07-09 18:16 | 1 |
chr19_rmsk.txt.gz | 3.2 MB | 2013-07-09 18:16 | 0 |
chr18_rmsk.txt.gz | 3.1 MB | 2013-07-09 18:16 | 3 |
chr17_rmsk.txt.gz | 4.0 MB | 2013-07-09 18:16 | 1 |
chr16_rmsk.txt.gz | 4.2 MB | 2013-07-09 18:16 | 4 |
chr15_rmsk.txt.gz | 3.7 MB | 2013-07-09 18:16 | 2 |
chr14_rmsk.txt.gz | 3.9 MB | 2013-07-09 18:16 | 0 |
chr13_rmsk.txt.gz | 4.0 MB | 2013-07-09 18:16 | 0 |
chr12_rmsk.txt.gz | 6.1 MB | 2013-07-09 18:15 | 3 |
chr11_rmsk.txt.gz | 5.9 MB | 2013-07-09 18:15 | 1 |
chr10_rmsk.txt.gz | 5.9 MB | 2013-07-09 18:15 | 2 |
chr9_rmsk.txt.gz | 5.5 MB | 2013-07-09 18:15 | 2 |
chr8_rmsk.txt.gz | 6.3 MB | 2013-07-09 18:15 | 13 |
chr7_rmsk.txt.gz | 6.9 MB | 2013-07-09 18:15 | 1 |
chr6_rmsk.txt.gz | 7.1 MB | 2013-07-09 18:15 | 3 |
chr5_rmsk.txt.gz | 7.6 MB | 2013-07-09 18:14 | 1 |
chr4_rmsk.txt.gz | 8.0 MB | 2013-07-09 18:14 | 1 |
chr3_rmsk.txt.gz | 8.6 MB | 2013-07-09 18:14 | 2 |
chr2_rmsk.txt.gz | 10.2 MB | 2013-07-09 18:14 | 2 |
chr1_rmsk.txt.gz | 10.6 MB | 2013-07-09 18:14 | 3 |
refGene.txt.gz | 4.4 MB | 2013-07-09 18:14 | 7 |
hg19 | |||
refGene.txt.gz | 4.5 MB | 2013-07-09 18:13 | 43 |
genomicSuperDups.txt.gz | 2.9 MB | 2013-07-09 18:13 | 122 |
rmsk.txt.gz | 140.0 MB | 2013-07-09 18:13 | 29 |
kegg_geneId_hsa01510.txt | 1.4 KB | 2013-07-09 18:10 | 2 |
DNDS_RefSeq.txt | 18.3 KB | 2013-07-09 18:10 | 2 |
Bottom_100_BrainVariance.txt | 1.1 KB | 2013-07-09 18:10 | 1 |
all_gene_variances.txt | 466.4 KB | 2013-07-09 18:10 | 1 |
6276_0.05Classifier.model | 96.6 KB | 2013-07-09 18:10 | 1 |
mousephenotypes_entrez_geneId_061108.txt | 56.9 KB | 2013-07-09 18:10 | 1 |
examples | |||
Affy60_example.CN5.5_10k.cn_segments | 66.1 KB | 2013-07-09 18:10 | 1 |
Decipher_unknown.txt | 1.2 KB | 2013-07-09 18:10 | 2 |
deprecated | |||
GeCCO_1.0.zip | 5.2 MB | 2013-07-09 18:00 | 2 |
bin_1_0_0 | |||
bin | |||
gpl.txt | 34.3 KB | 2010-03-04 05:41 | 1 |
log4jconfig.txt | 0.5 KB | 2010-03-03 01:04 | 5 |
error_messages.txt | 0.6 KB | 2010-03-03 01:04 | 1 |
configfile.txt | 1.5 KB | 2010-03-03 01:04 | 3 |
CNVClassifierGUI.bat | 0.2 KB | 2010-03-03 01:03 | 1 |
lib | |||
weka.jar | 5.0 MB | 2010-03-03 01:30 | 1 |
mysql-connector-java-3.1.8-bin.jar | 399.6 KB | 2010-03-03 01:29 | 4 |
log4j-1.2.13.jar | 349.8 KB | 2010-03-03 01:29 | 3 |
CNVClassifier.jar | 118.5 KB | 2010-03-03 01:29 | 4 |
examples | |||
Small_Affy60_example.CN5.5_10k.cn_segments | 11.1 KB | 2010-03-03 01:29 | 1 |
etc | |||
mousephenotypes_entrez_geneId_061108.txt | 56.9 KB | 2010-03-03 01:28 | 2 |
kegg_geneId_hsa01510.txt | 1.4 KB | 2010-03-03 01:28 | 1 |
DNDS_RefSeq.txt | 18.3 KB | 2010-03-03 01:28 | 1 |
Bottom_100_BrainVariance.txt | 1.1 KB | 2010-03-03 01:05 | 1 |
all_gene_variances.txt | 466.4 KB | 2010-03-03 01:05 | 1 |
6276_0.05Classifier.model | 96.6 KB | 2010-03-03 01:04 | 1 |
README.txt | 6.2 KB | 2013-07-09 17:48 | 3 |
test_GeCCO_environment.bat | 1.1 KB | 2010-05-26 21:40 | 6 |
Using GeCCO to classify CNVs.doc | 202.0 KB | 2010-05-19 16:15 | 6 |
Examples | |||
Small_Affy60_example.CN5.5_10k.cn_segments | 11.1 KB | 2010-02-12 22:16 | 3 |